Precision Farming: Technologies and Information as Risk-Reduction Tools

Hall, T.G.R.; Hall, Tracy; Hall, T.E.; Hall, Franklin R.; Hall, Frank S.; Hall, Judith G.; Hall, Deborah A.; Hall, Ben A.; Hall, Alison; Hall, John A.; Hall, T. A.; Hall, Dennis A.; Hall, Gregory A.; Hall, Jeremy A.; Hall, Ken J.; Hall, Cody A.; Hall, L. A.; Hall, Carole; Hall, M. H. J. A. D.; Hall, UA; Hall, Amanda; Hall, Timothy C.; Hall, S; Hall, Eric; Hall, Dan

doi:10.1021/bk-1999-0734.ch008

Cited by 323 publications

(81 citation statements)

References 6 publications

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“…Consensus sequences were generated from both forward and reverse primer reads in BioEdit sequence alignment editor version 7.2.5 (Hall 1999) and then homology searches were performed at the National Center for Biotechnology Information (NCBI) Web site using BLAST. These BLAST results, along with the sequences recently employed in the phylogeny of Coprinellus (Nagy et al 2012), were used in the phylogenetic analyses.…”

Section: Methodsmentioning

confidence: 99%

The genus Coprinellus (Basidiomycota; Agaricales) in Pakistan with the description of four new species

Hussain

Usman

Afshan

et al. 2018

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Mushrooms with a thin-fleshed pileus that becomes plicate on opening, deliquescent lamellae and dark brown to blackish basidiospores are commonly called coprinoid mushrooms. The genus Coprinellus is one of the important lineages of coprinoid mushroom in the family Psathyrellaceae. Species-level taxonomy in Coprinellus is based mainly on the presence or absence and the structure of veil and cystidia on the pileus, of cystidia on the lamellae and on basidiospore morphology. In this study, four new species of Coprinellus (Co.campanulatus, Co.disseminatus-similis, Co.pakistanicus and Co.tenuis) are described from Pakistan. Species descriptions are based on morphological and molecular data. Phylogenetic analyses based on nuc rDNA ITS region show that the new species Co.campanulatus and Co.disseminatus-similis are clustered in a clade including members of section Micacei; Co.tenuis falls in a clade with members of section Domestici; and Co.pakistanicus recovered in a separate clade adjacent to other recently described clades of genus Coprinellus. Morpho-anatomical descriptions of the new species and comparison with closely allied taxa are provided. With this study, the number of known species of Coprinellus in Pakistan has reached eight.

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Section: Methodsmentioning

confidence: 99%

The genus Coprinellus (Basidiomycota; Agaricales) in Pakistan with the description of four new species

Hussain

Usman

Afshan

et al. 2018

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“…Specimens were extracted from soil using decanting and sieving method (Brown & Boag, 1988) and several specimens were picked individually and transferred to DESS (Yoder et al, 2006). Remaining specimens were heat killed, TAF fi xed (Courtney et al, 1955), transferred to glycerol as described by Seinhorst (1959) and used for a study of morphology. Observations and measurements were made using Zeiss Axioscope II microscope.…”

Section: Methodsmentioning

confidence: 99%

“…Quality of obtained chromatograms was assessed using Chromas Lite 2.1.1 (Technelysium Pty Ltd, South Brisbane, Australia). Subsequently, consensus sequences were obtained in BioEdit (Hall, 1999) and deposited in GenBank under KY513282-3 and KY513284-5 for D2-D3 and ITS1 sequences, respectively. Results of BLAST search refer to the whole D2-D3 28S rDNA region while (partial)18S-ITS1-5.8S(partial) was trimmed before search to include the ITS1 only.…”

Section: Methodsmentioning

confidence: 99%

Research Note. New data on plant parasitic nematode Longidorus distinctus Lamberti, Choleva & Agostinelli, 1983 (Nematoda: Longidoridae) from Poland

Kornobis

Sobczyńska

2017

Helminthologia

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SummaryDuring a survey on the occurrence of the plant parasitic nematodes of the family Longidoridae in Poland, 925 soil samples were taken. Longidorus distinctus was present in 10 (1.08 %) of these samples. In this Research Note we provide: 1) distribution map of these populations, 2) morphometric data, 3) sequence data for D2-D3 28S rDNA and (partial)18S-ITS1 -5.8S(partial) markers and 4) LdistFOR primer (5'-GGCTGTAAAGATATATGCGT-3') effective in obtaining ITS1 sequence for the species. Morphometric similarities and dissimilarities with data on other published populations are discussed.

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“…One sample contained both GI.3 and GI.7, and both were included in the overall count (Table 2) HuNoV GI and GII genotypes (GII. 2,5,7,9,11,12,14,15,16,18,19,20, and 21) were not found ( Table 2). …”

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confidence: 97%

“…Multiple sequence alignment and phylogenetic trees were constructed using BioEdit (ver. 7.1.3) [11] and MEGA software (ver. 6.06) [12].…”

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confidence: 99%

Prevalence of Human Norovirus by Genotype in Contaminated Groundwater in Korea Over the Last Decade (2007-2016)

Lee¹,

Park²,

Kim³

et al. 2017

Preprint

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This study investigated the presence of human Norovirus (HuNoV) by genotype in 1,486 groundwater samples, collected from 843 groundwater wells suspected of contamination during 2007−2016, in Republic of Korea. We identified and genotyped 186 HuNoV sequences in 178HuNoV-positive samples using the RIVM-NoroNet norovirus genotyping tool (NGT) and phylogenetic tree analysis based on RIVM-NoroNet reference sequences. HuNoV GII was more prevalent than GI. The major genotypes detected were HuNoV GII.4 (43.0%), GII.22 (15.6%), GI.5 (10.2%) and GI.1 (8.6%); 14 genotypes accounted for < 5.0%. Increasing HuNoV Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 5

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Precision Farming: Technologies and Information as Risk-Reduction Tools

Cited by 323 publications

References 6 publications

The genus Coprinellus (Basidiomycota; Agaricales) in Pakistan with the description of four new species

The genus Coprinellus (Basidiomycota; Agaricales) in Pakistan with the description of four new species

Research Note. New data on plant parasitic nematode Longidorus distinctus Lamberti, Choleva & Agostinelli, 1983 (Nematoda: Longidoridae) from Poland

Prevalence of Human Norovirus by Genotype in Contaminated Groundwater in Korea Over the Last Decade (2007-2016)

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