Protein crystallization is a crucial step in the study of protein structure and function, [1] as well as in biosensing. [2][3][4] In many cases, it proceeds under ill-controlled conditions, which make it difficult to predict the outcome or feasibility. On the other hand, controlled two-dimensional (2D) protein recrystallization has been mainly accomplished through metal-ion coordination to accessible histidine residues [5] or specific interactions with high-affinity ligands.[6] Both approaches, however, involve knowledge of the protein structure and, in some cases, protein engineering. In this work, we show that control of the morphology of a 2D wild-type protein crystal is possible by using a chemical nanotuner as a substrate. In this way, nonspecific substrate-protein interactions can be finely modulated to select the self-assembly pathway to the corresponding protein crystal. Our model system consists of a bacterial S-layer, a two-dimensional (glyco)protein crystal located in the cell wall of many prokaryotic organisms.[7] The S-layers act as selective, protective barriers that mediate cell development.[8] The chemical nanotuner is a set of selfassembled monolayers (SAMs) of dialkyldisulfide derivatives with the formula CH 3 (CH 2 ) 11+m SS(CH 2 ) 11 OH, in which m is the chain-length difference in methylene units between the methyl-and the hydroxy-terminated branches.[9] The resulting surface is composed of OH-and CH 3 -terminated thiolates in a stand-up conformation with a defined chemical functionality ratio of 50 %. These SAMs contain submolecular protrusions whose nature is controlled by the m value: m < 0 indicates that the protruding chains are OH terminated, whereas m > 0 denotes that the surface protrusions are methyl functionalized (Figure 1). The variation in the m value determines the protein-recrystallization route.