“…The somatic TNA mutation at nucleotide 1799 causing the V600E mutation in the BRAF gene was determined using a fluorescent allele-specific PCR assay as has been previously described [25]. Briefly, 20 to 50 ng of DNA, extracted from formalin-fixed, paraffin-embedded tumor tissue, was amplified in a 25-μL reaction containing 100 nmol/L each of allele-specific primers tagged with differing fluorophores (mutant primer [F1]: 6-Fam-5′-CAGTGATTTTGGTCTAGCTTCAGA-3′; wild-type primer (F2): NED-5′-TGATTTTGGTCTAGCTACAGT-3′; and a common reverse primer [reverse primer, REV]: 5′-CTC-AATTCTTACCATCCACAAAATG-3′), together with 2.5 units of Taq polymerase (Eppendorf, Hamburg, Germany), 1× buffer and 200 μmol/L of deoxyribonucleotide triphosphatase (dNTP).…”