Saccharopolyspora shandongensis sp. nov., isolated from wheat-field soil

Zhang, Jianli; Wu, Dong‐Dong; Zhang, Jun; Liu, Zhiheng; Song, Fei

doi:10.1099/ijs.0.65521-0

Cited by 31 publications

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References 49 publications

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“…At the time of writing, the genus Saccharopolyspora contained 22 species and one subspecies with validly published names: Saccharopolyspora hirsuta (Lacey & Goodfellow, 1975), S. erythraea (Labeda, 1987), S. taberi (Labeda, 1987; Korn-Wendisch et al , 1989), S. gregorii (Goodfellow et al , 1989), S. hordei (Goodfellow et al , 1989), S. rectivirgula (Korn-Wendisch et al , 1989), S. hirsuta subsp. kobensis (Lacey, 1989), S. spinosa (Mertz & Yao, 1990), S. spinosporotrichia (Zhou et al , 1998), S. flava (Lu et al , 2001), S. thermophila (Lu et al , 2001), S. antimicrobica (Yuan et al , 2008), S. shandongensis (Zhang et al , 2008), S. cebuensis (Pimentel-Elardo et al , 2008), S. halophila (Tang et al , 2009a, b), S. jiangxiensis (Zhang et al , 2009), S. rosea (Yassin, 2009), S. qijiaojingensis (Tang et al , 2009a, b), S. tripterygii (Li et al , 2009), S. gloriosae (Qin et al , 2010), S. phatthalungensis (Duangmal et al , 2010), …”

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confidence: 99%

Saccharopolyspora halotolerans sp. nov., a halophilic actinomycete isolated from a hypersaline lake

Zhang

Xia

et al. 2014

International Journal of Systematic and Evolutionary Microbiology

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A novel actinomycete strain, designated TRM 45123 T , was isolated from a hypersaline habitat in Xinjiang Province (406 209 N 906 499 E), northwest China. The isolate was characterized using a polyphasic approach. 16S rRNA gene sequence analysis indicated that strain TRM 45123 T belonged to the genus Saccharopolyspora and was closely related to Saccharopolyspora gloriosae (96.7 % similarity). The G+C content of the DNA was 69.07 mol%. The isolate contained meso-diaminopimelic acid as the diagnostic diamino acid, and arabinose and ribose as the major whole-cell sugars. The diagnostic phospholipids were phosphatidylethanolamine, phosphatidylcholine and phosphatidylglycerol. The predominant menaquinone was MK-9(H 4). The major fatty acids were iso-C 16 : 0 , anteiso-C 17 : 0 , iso-C 15 : 0 and anteiso-C 15 : 0. On the basis of the evidence from this polyphasic study, a novel species, Saccharopolyspora halotolerans sp. nov., is proposed. The type strain of Saccharopolyspora halotolerans is TRM 45123 T (5CCTCC AA 2013006 T 5DSM 45990 T).

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Saccharopolyspora halotolerans sp. nov., a halophilic actinomycete isolated from a hypersaline lake

Zhang

Xia

et al. 2014

International Journal of Systematic and Evolutionary Microbiology

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“…The genus Saccharopolyspora was first described by Lacey & Goodfellow (1975) and was assigned to the family Pseudonocardiaceae (Warwick et al, 1994). At the time of writing, the genus consists of 21 recognized species, namely Saccharopolyspora hirsuta (Lacey & Goodfellow, 1975), S. erythraea (Labeda, 1987), S. taberi and S. rectivirgula (Korn-Wendisch et al, 1989), S. gregorii and S. hordei (Goodfellow et al, 1989), S. spinosa (Mertz & Yao, 1990), S. spinosporotrichia (Zhou et al, 1998), S. flava and S. thermophila (Lu et al, 2001), S. antimicrobica (Yuan et al, 2008), S. shandongensis (Zhang et al, 2008), S. cebuensis (Pimentel-Elardo et al, 2008), S. halophila (Tang et al, 2009a), S. jiangxiensis (Zhang et al, 2009), S. tripterygii (Li et al, 2009), S. rosea (Yassin, 2009), S. qijiaojingensis (Tang et al, 2009b), S. gloriosae (Qin et al, 2010), S. phatthalungensis (Duangmal et al, 2010) and S. lacisalsi (Guan et al, 2011). Four additional species, 'S.…”

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Saccharopolyspora indica sp. nov., an actinomycete isolated from the rhizosphere of Callistemon citrinus (Curtis)

Vaddavalli

Peddi

Kothagauni

et al. 2014

International Journal of Systematic and Evolutionary Microbiology

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Saccharopolyspora indica sp. nov., an actinomycete isolated from the rhizosphere of Callistemon citrinus (Curtis) Electron Microscope Facility, NIN, Tarnaka, Hyderabad-500007, Andhra Pradesh, IndiaA novel actinomycete strain, designated VRC122 T , was isolated from a Callistemon citrinus rhizosphere sample collected from New Delhi, India, and its taxonomic status was determined by using a polyphasic approach. Strain VRC122T was a Gram-stain-positive, aerobic, non-motile, non-acid-alcohol-fast strain. Phylogenetic analysis based on 16S rRNA gene sequences showed the strain was placed in a well-separated sub-branch within the genus Saccharopolyspora. The highest levels of 16S rRNA gene sequence similarity were found with Saccharopolyspora hirsuta subsp. kobensis JCM 9109 T (98.71 %), Saccharopolyspora antimicrobica I05-00074 T (98.69 %) and Saccharopolyspora jiangxiensis W12 T (98.66 %); 16S rRNA gene sequence similarities with type strains of all other species of the genus Saccharopolyspora were below 98 %. Chemosystematic studies revealed that it contained meso-diaminopimelic acid. Arabinose and galactose were the predominant whole-cell sugars. Diagnostic polar lipids were diphosphatidylglycerol, phosphatidylinositol and phosphatidylcholine. MK-9(H 6 ) was the predominant menaquinone. C 14 : 0 , C 16 : 0 , iso-C 15 : 0, iso-C 16 : 0 , iso-C 17 : 0 , anteiso-C 15 : 0 , anteiso-C 17 : 0 , C 17 : 0 cyclo and summed feature 3 (C 16 : 1 v7c and/or C 16 : 1 v6c) were the major cellular fatty acids. The G+C content of the genomic DNA was 69.5 mol%. The results of DNA-DNA hybridization (30 %, 22 % and 25 %, respectively) with type strains of the above-mentioned species, in combination with differences in physiological and biochemical data supported that strain VRC122 T represents a novel species of the genus Saccharopolyspora, for which the name Saccharopolyspora indica sp. nov., is proposed. The type strain is VRC122 T (5KCTCThe genus Saccharopolyspora was first described by Lacey & Goodfellow (1975) and was assigned to the family Pseudonocardiaceae (Warwick et al., 1994). At the time of writing, the genus consists of 21 recognized species, namely Saccharopolyspora hirsuta (Lacey & Goodfellow, 1975) cavernae ' (Cheng et al., 2013), have been published but the names that are yet to be validly published. In the present study, we describe the taxonomic characterization of a novel species of the genus Saccharopolyspora. Strain VRC122T was isolated from a rhizosphere sample of Callistemon citrinus (Curtis) Skeels, from New Delhi, IndiaThe GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain VRC122T is JX411621. (GPS coordinates for the sampling site: 28 u 369 500 N 77 u 129 320 E), with the prospect that they might produce novel antimicrobial agents. Soil samples were collected in sterile tubes and brought to the laboratory of Osmania University, Hyderabad, India. Samples were dried in laminar flow under aseptic conditions. By using the serial dilution technique, samples were made up to 10 25 dilu...

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Saccharopolyspora

Kim¹,

Goodfellow²

2015

Bergey's Manual of Systematics of Archaea and Bacteria

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Sac.cha.ro.po.ly.spo'ra. N.L. n. Saccharum generic name of sugar cane; Gr. adj. polus many; Gr. n. spora a seed, and in biology a spore; N.L. fem. n. Saccharopolyspora the many spored (organism) from sugar cane. Actinobacteria / Actinobacteria / Pseudonocardiales / Pseudonocardiaceae / Saccharopolyspora Aerobic, Gram‐stain‐positive, non‐acid‐fast, nonmotile, catalase‐positive actinobacteria which form an extensively branched substrate mycelium that typically fragments into coccoid and/or rod‐shaped elements . In some species, the substrate hyphae remain intact or are partially transformed into chains of spores. Aerial hyphae, when present, generally differentiate into bead‐like chains of spores contained within a smooth sheath . Spores are borne in straight, flexuous, hooked, looped, or spiral chains. Spore surfaces can be hairy, smooth, spiny, rough, or warty. Substrate mycelia may be buff, brownish red, orange, or yellow and aerial mycelia are white to gray or pinkish white. Diverse compounds are used as sole carbon sources for energy and growth. Whole‐organism hydrolysates contain meso ‐diaminopimelic acid, arabinose, and galactose. Muramic acid moieties are N ‐acetylated. Cells contain tetrahydrogenated menaquinones with nine isoprene units as the predominant menaquinone, phosphatidylcholine, phosphatidylethanolamine, and phosphatidylmethylethanolamine as major polar lipids, and fatty acid profiles rich in iso‐ and anteiso‐branched chain components, but lack mycolic acids . The phylogenetic position of Saccharopolyspora , as determined by 16S rRNA gene sequencing, is in the family Pseudonocardiaceae . DNA G + C content ( mol %): 66–77. Type species : Saccharopolyspora hirsuta Lacey and Goodfellow 1975, 02 99 78 AL .

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Saccharopolyspora shandongensis sp. nov., isolated from wheat-field soil

Cited by 31 publications

References 49 publications

Saccharopolyspora halotolerans sp. nov., a halophilic actinomycete isolated from a hypersaline lake

Saccharopolyspora halotolerans sp. nov., a halophilic actinomycete isolated from a hypersaline lake

Saccharopolyspora indica sp. nov., an actinomycete isolated from the rhizosphere of Callistemon citrinus (Curtis)

Saccharopolyspora

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