Mate selection and maintenance of genetic diversity is crucial to successful reproduction and species survival. Plants utilize self-incompatibility system as a genetic barrier to prevent self pollen from developing on the pistil, leading to hybrid vigor and diversity. In Brassica (canola, kale, and broccoli), an allele-specific interaction between the pollen SCR/SP11 (S-locus cysteine rich protein/S locus protein 11) and the pistil S Receptor Kinase, results in the activation of SRK which recruits the Arm Repeat Containing 1 (ARC1) E3 ligase to the proteasome. The targets of Arm Repeat Containing 1 are proposed to be compatibility factors, which when targeted for degradation by Arm Repeat Containing 1 results in pollen rejection. Despite the fact that protein degradation is predicted to be important for successful self-pollen rejection, the identity of the various proteins whose abundance is altered by the SI pathway has remained unknown. To identify potential candidate proteins regulated by the SI response, we have used the two-dimensional difference gel electrophoresis analysis, coupled with matrix-assisted laser desorption ionization/time of flight/MS. We identified 56 differential protein spots with 19 unique candidate proteins whose abundance is down-regulated following self-incompatible pollinations. The identified differentials are predicted to function in various pathways including biosynthetic pathways, signaling, cytoskeletal organization, and exocytosis. Recognition of suitable pollen is a key aspect of reproductive success of angiosperms. Despite having little control over the type of pollen that lands on the stigma of the pistil, many plant species have developed elaborate recognition systems to allow the growth of only suitable pollen grains and to reject genetically similar (self-incompatible) and incompatible mates in order to increase the probability of successful reproduction and survival. Adherence of compatible pollen grains to the stigmatic papillae results in early signaling events leading to hydraulic connectivity with the stigma, which facilitates movement of water into the pollen grains. Following hydration, pollen grains germinate and produce tubes that penetrate the stigmatic cell walls and traverse the pistil down to the ovules where fertilization takes place (1, 2). In species of Brassicaceae (canola, broccoli, cabbage, Arabidopsis), which are characterized by dry stigmas, this recognition occurs at the earliest stages of pollen adhesion and hydration. Only compatible pollen is capable of inducing the stigma to release its resources such as water and other factors necessary for pollen growth, whereas incompatible pollen is blocked either prior to hydration or during attempts to penetrate the stigmatic barrier (3). Although multiple genetic screens have identified various compatible pollen factors necessary for the initial recognition mechanisms, the molecules or mechanisms behind delivery of stigma factors necessary to support pollen growth remain largely unknown (3, 4). The lipids o...