The complete mitochondrial genome of the Ferruginous Duck (<i>Aythya nyroca</i>) from Ningxia, China

Hongjuan, Zhai; Li, Zongzhi; Mi, Shuhui; Meng, Dehuai; Yu, Hongxian; Teng, Liwei; Liu, Zhensheng

doi:10.1080/23802359.2020.1870901

Cited by 5 publications

(2 citation statements)

References 4 publications

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“…A complete mitochondrial genome is one of the unique genetic characters suitable for the purpose and plays an important role in phylogenetic relationships discovery (Zhai et al. 2021 ). In this study, we report LSC’s complete mitochondrial genome sequence.…”

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confidence: 99%

The complete mitochondrial genome of the Anas platyrhynchos Linnaeus, 1758 breed Longshengcui and its phylogenetic analyses

Zhang

Wang

et al. 2023

Mitochondrial DNA Part B

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Duck breed Longshengcui ( Anas platyrhynchos Linnaeus, 1758 breed Longshengcui, LSC) is one of the famous native breed of the Guangxi Zhuang Nationality Autonomous Region in China. In this study, we report the complete mitochondrial genome of LSC. The mitogenome (GenBank accession no. MZ895120) has 16,602 bp in length and consisted of the well-known 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and the control region. The phylogenetic analysis showed that LSC and Zhijiang duck have highly similar genetic relationship. These results are helpful for the conservation of genetic resources and phylogeny of this species.

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confidence: 99%

The complete mitochondrial genome of the Anas platyrhynchos Linnaeus, 1758 breed Longshengcui and its phylogenetic analyses

Zhang

Wang

et al. 2023

Mitochondrial DNA Part B

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“…DNA was collected according to the cetyltrimethylammonium bromide (CTAB) DNA extraction protocol (Zhai et al. 2021 ). The complementary DNA (cDNA) library was constructed and sequenced by using the Illumina NovaSeq at Jin Bei Biotech (Harbin, China).…”

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confidence: 99%

Sequencing and analysis of the complete mitochondrial genome of Gymnogobius laevis

Peng

et al. 2022

Mitochondrial DNA Part B

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Gymnogobius laevis (Steindachner, 1879) is a small, benthic freshwater fish. In a previous study, it was reported as a rare resident in Heilongjiang Province. In this study, the mitochondrial genome of G. laevis was sequenced. It is 16,519 base pairs (bp) in length and contains 13 protein-coding genes, two ribosomal RNA genes (12S rRNA and 16S rRNA), 22 transfer RNA genes (tRNA), and two non-coding control regions. The A + T content is 55.71% in the G. laevis mitochondrial genome. A phylogenetic tree shows that G. laevis is closely related to the family Gobiinae based on complete mitogenome sequences.

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Mitochondrial genome of the Indian spot-billed duck and its phylogenetic and conservation implications

Nagarajan,

Kamalakkannan,

Prabhu

et al. 2024

Sci Rep

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The Indian spot-billed duck, Anas poecilorhyncha is a large dabbling and non-migratory breeding bird. The identification and phylogenetic relationship of A. poecilorhyncha remain uncertain due to the presence of overlapping meristic characters and hybridization with closely related species. Molecular data aids when there are challenges in morphological identification. However, genetic characterization of A. poecilorhyncha has been paid less attention. Apart from their functional and physiological role, mitochondrial genome can also be used for various purposes, including species identification, phylogenetic analysis, understanding the domestication history of species etc. Therefore, the present study aimed to sequence the mitochondrial genome of A. poecilorhyncha and its closely related domestic species A. platyrhynchos (mallard duck) to understand their mitochondrial genome structure and phylogenetic relationships. The length of mitochondrial genome of A. poecilorhyncha and A. platyrhynchos was 16,608 and 16,604 bp respectively. Mitochondrial genome contained 37 genes and a non-coding control region. Overall, the characteristics of mitochondrial genome of both species were found to be conserved. The phylogenetic tree exhibited seven major clades (A to G) with a high bootstrap support. Notably, the Indian A. poecilorhyncha population formed a distinct clade (C) whereas the A. poecilorhyncha that were probably sampled from China grouped along with A. zonorhyncha (clade B) . Besides, one of the A. poecilorhyncha probably sampled from China was placed in the clade A, which predominantly consisted of A. platyrhynchos. It suggests that Indian A. poecilorhyncha population is genetically different from Chinese A. poecilorhyncha population. Further, it sheds light on the importance of conducting a comprehensive phylogenetic study on these species. The newly sequenced mitochondrial genome of A. poecilorhyncha and A. platyrhynchos would be useful not only to have a better understanding of the phylogeny and evolution of Anas species but also to help in the conservation of A. poecilorhyncha which is under constant threat from rapid urbanization, interspecific hybridization and other human activities.

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The complete mitochondrial genome of the Ferruginous Duck (Aythya nyroca) from Ningxia, China

Cited by 5 publications

References 4 publications

The complete mitochondrial genome of the Anas platyrhynchos Linnaeus, 1758 breed Longshengcui and its phylogenetic analyses

The complete mitochondrial genome of the Anas platyrhynchos Linnaeus, 1758 breed Longshengcui and its phylogenetic analyses

Sequencing and analysis of the complete mitochondrial genome of Gymnogobius laevis

Mitochondrial genome of the Indian spot-billed duck and its phylogenetic and conservation implications

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