Grafting is a common method of variety propagation in loquat breeding, the slow growth of rootstocks is a main factor limiting the expansion of this technique. This study aimed to evaluate the effects of seven different fertilizer formulas on the growth of loquat rootstock seedlings, five water-soluble fertilizer formulas, as well as organic fertilizer and controlled-release fertilizer were evaluated. An unfertilized control (CK) was also performed. Growth indicators including plant height, stem thickening and lignification, leaf area, root development, dry matter accumulation, spatial distribution of nutrient elements, and cross-sectional anatomy of stem were measured. The results showed that the addition of microelements in fertilizer could significantly delay the lignification process of the cambium, which exhibiting the greatest improvement in stem thickening. Phosphorus nutrition could significantly promote the occurrence of fibrous roots, while excessive phosphorus supply might disturb the absorption and utilization of nitrogen of roots, intensify the lignification process of the main stem, and then affect the growth of the aboveground part. The findings of this research could provide a theoretical basis for identifying an optimum fertilization formula and technique for promoting the rapid growth and accelerating the lignification process at different stages of loquat rootstock seedling growth. Loquat (Eriobotrya japonica (Thunb.) Lindl., Maloideae, Rosaceae) is indigenous to China and represents one of the most important fruit species in subtropical areas of China 1. Traditionally, there are several problems existed that limiting the propagation of loquat varieties, one is that seed reproduction takes too long juvenescent phase and seedling progeny cannot maintain variety characteristics due to genetic variation 2 , another problem is that explants are prone to browning in loquat asexual propagation system due to the higher content of phenols as compared with other Rosaceae fruit trees, therefore, callus proliferation needs strict selection of explants and proper medium. For example, Zhang 3 reported that in tissue culture of loquat, leaf explants collected 5 days after bud sprouting were prone to severe browning and the highest mortality rate, whereas 10-day-old leaf explants showed minor browning symptoms and rapidly induced large quantity of granular light-green tight, high quality calluses, 15-day-old leaf explants also showed minor browning symptoms, but the generated calluses were yellow and loose, with lower proliferation efficiency. What is more, different varieties and ploidy materials of loquat have different requirements on medium formulation, especially hormone concentration and composition 4 , the asexual propagation system suitable for one loquat variety can not be directly copied and extended to other varieties, most importantly, even if asexual plant regeneration is successful, it will take another 7-8 years to grow into adult fruit trees. Therefore, grafting is still one of the most import...