“…Analysis of HBV sequences from a family transmission network found the precore and middle region of the S gene to be hotspots for sequence diversity compared with the relative conservation of these regions between genotypes 112 . Opposing effects on HBV genetic diversity are presented in Table 2 43, 63, 64, 74, 102, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125Table 2Determinants of Diversity and Conservation Within HBVHBV attribute | Factors associated with sequence conservation | Factors associated with sequence diversity |
Genome structure and sequence | Overlapping ORFs and regulatory regions in viral genome (Figures 2 A and 3 B ) impose constraint on viral plasticity 102 because nonsynonymous mutations have to be accommodated within 2 different proteins to be viable; this makes most mutations disadvantageous, 113 an example of constrained evolution 114 . |
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