Bacterial biological control agents (BCAs) are largely used as live products to control plant pathogens. However, due to variable environmental and ecological factors, live BCAs usually fail to produce desirable results against foliar pathogens. In this study, we investigated the potential of cell-free culture filtrates of 12 different bacterial BCAs isolated from flower beds for controlling foliar diseases caused by Alternaria spp. In vitro studies showed that culture filtrates from two isolates belonging to Bacillus subtilis and Bacillus amyloliquefaciens displayed strong efficacy and potencies against Alternaria spp. The antimicrobial activity of the culture filtrate of these two biological control agents was effective over a wider range of pH (3.0 to 9.0) and was not affected by autoclaving or proteolysis. Comparative liquid chromatography-mass spectrometry (LC-MS) analyses showed that a complex mixture of cyclic lipopeptides, primarily of the fengycin A and fengycin B families, was significantly higher in these two BCAs than inactive Bacillus spp. Interaction studies with mixtures of culture filtrates of these two species revealed additive activity, suggesting that they produce similar products, which was confirmed by LC-tandem MS analyses. In in planta pre-and postinoculation trials, foliar application of culture filtrates of B. subtilis reduced lesion sizes and lesion frequencies caused by Alternaria alternata by 68 to 81%. Taken together, our studies suggest that instead of live bacteria, culture filtrates of B. subtilis and B. amyloliquefaciens can be applied either individually or in combination for controlling foliar diseases caused by Alternaria species.
Many species in the genus Alternaria cause significant yield and quality losses in food and ornamental crops (1). These species primarily attack aerial plant parts, including foliage, fruits, and stems, and cause a variety of symptoms ranging from necrotic leaf spots to enlarged blighted shoots, eventually resulting in defoliation and loss in yield and quality. Alternaria diseases could be managed with a combination of cultural practices, fungicides, and, if available, genetic resistance. Since many crop cultivars lack sufficient resistance to Alternaria spp., fungicide sprays are the primary means of controlling Alternaria diseases (1). However, loss in the efficacy of several commonly used fungicides for controlling Alternaria spp. has been reported (2-6). Loss of effective fungicides requires discovery and development of new and safe alternative chemicals. Although fungicides with newer chemistry are promising, their introduction into crop production systems is slow, and resistant field isolates of the pathogen usually appear very quickly, within a few seasons of the introduction of a new fungicide (5, 7, 8). As with many other plant pathogens, in most cases fungicide resistance in Alternaria spp. has been attributed to single-site mutations in the target genes (see, e.g., references 9, 10, and 11). Therefore, finding multisite-acting fungicides t...