Two forms of killer whale (Orcinus orca), resident and transient, occur sympatrically in coastal waters of British Columbia, Washington State, and southeastern Alaska. The two forms do not mix, and differ in seasonal distribution, social structure, and behaviour. These distinctions have been attributed to apparent differences in diet, although no comprehensive comparative analysis of the diets of the two forms had been undertaken. Here we present such an analysis, based on field observations of predation and on the stomach contents of stranded killer whales collected over a 20-year period. In total, 22 species of fish and 1 species of squid were documented in the diet of resident-type killer whales; 12 of these are previously unrecorded as prey of O. orca. Despite the diversity of fish species taken, resident whales have a clear preference for salmon prey. In field observations of feeding, 96% of fish taken were salmonids. Six species of salmonids were identified from prey fragments, with chinook salmon (Oncorhynchus tshawytscha) being the most common. The stomach contents of stranded residents also indicated a preference for chinook salmon. On rare occasions, resident whales were seen to harass marine mammals, but no kills were confirmed and no mammalian remains were found in the stomachs of stranded residents. Transient killer whales were observed to prey only on pinnipeds, cetaceans, and seabirds. Six mammal species were taken, with over half of observed attacks involving harbour seals (Phoca vitulina). Seabirds do not appear to represent a significant prey resource. This study thus reveals the existence of strikingly divergent prey preferences of resident and transient killer whales, which are reflected in distinctive foraging strategies and related sociobiological traits of these sympatric populations.

Rather than benefiting wild fish, industrial aquaculture may contribute to declines in ocean fisheries and ecosystems. Farm salmon are commonly infected with salmon lice (Lepeophtheirus salmonis), which are native ectoparasitic copepods. We show that recurrent louse infestations of wild juvenile pink salmon (Oncorhynchus gorbuscha), all associated with salmon farms, have depressed wild pink salmon populations and placed them on a trajectory toward rapid local extinction. The louse-induced mortality of pink salmon is commonly over 80% and exceeds previous fishing mortality. If outbreaks continue, then local extinction is certain, and a 99% collapse in pink salmon population abundance is expected in four salmon generations. These results suggest that salmon farms can cause parasite outbreaks that erode the capacity of a coastal ecosystem to support wild salmon populations.

The continuing decline of ocean fisheries and rise of global fish consumption has driven aquaculture growth by 10% annually over the last decade. The association of fish farms with disease emergence in sympatric wild fish stocks remains one of the most controversial and unresolved threats aquaculture poses to coastal ecosystems and fisheries. We report a comprehensive analysis of the spread and impact of farm-origin parasites on the survival of wild fish populations. We mathematically coupled extensive data sets of native parasitic sea lice (Lepeophtheirus salmonis) transmission and pathogenicity on migratory wild juvenile pink (Oncorhynchus gorbuscha) and chum (Oncorhynchus keta) salmon. Farm-origin lice induced 9 -95% mortality in several sympatric wild juvenile pink and chum salmon populations. The epizootics arise through a mechanism that is new to our understanding of emerging infectious diseases: fish farms undermine a functional role of host migration in protecting juvenile hosts from parasites associated with adult hosts. Although the migratory life cycles of Pacific salmon naturally separate adults from juveniles, fish farms provide L. salmonis novel access to juvenile hosts, in this case raising infection rates for at least the first Ϸ2.5 months of the salmon's marine life (Ϸ80 km of the migration route). Spatial segregation between juveniles and adults is common among temperate marine fishes, and as aquaculture continues its rapid growth, this disease mechanism may challenge the sustainability of coastal ecosystems and economies.aquaculture ͉ emerging infectious disease ͉ migration ͉ salmon ͉ sea lice

This study compared sea lice (Lepeophtheirus salmonis) infestation rates on juvenile pink (Oncorhynchus gorbuscha) and chum (Oncorhynchus keta) salmon in five nearshore areas of the British Columbia coast selected on the basis of proximity to salmon farms. A 10-week study in the Broughton Archipelago found sea lice were 8.8 times more abundant on wild fish near farms holding adult salmon and 5.0 times more abundant on wild fish near farms holding smolts than in areas distant from salmon farms. We found that 90% of juvenile pink and chum salmon sampled near salmon farms in the Broughton Archipelago were infected with more than 1.6 lice·(g host mass)–1, a proposed lethal limit when the lice reach mobile stages. Sea lice abundance was near zero in all areas without salmon farms. Salinity and temperature differences could not account for the higher infestation rates near the fish farms. The most immature life stages dominated the lice population throughout the study, suggesting the source of lice was a stationary, local salmonid population. No such wild population could be identified. The evidence from this control–impact study points to a relationship between salmon farms and sea lice on adjacent, wild, juvenile salmon.

BackgroundPiscine reovirus (PRV) is a newly discovered fish reovirus of anadromous and marine fish ubiquitous among fish in Norwegian salmon farms, and likely the causative agent of heart and skeletal muscle inflammation (HSMI). HSMI is an increasingly economically significant disease in Atlantic salmon (Salmo salar) farms. The nucleotide sequence data available for PRV are limited, and there is no genetic information on this virus outside of Norway and none from wild fish.MethodsRT-PCR amplification and sequencing were used to obtain the complete viral genome of PRV (10 segments) from western Canada and Chile. The genetic diversity among the PRV strains and their relationship to Norwegian PRV isolates were determined by phylogenetic analyses and sequence identity comparisons.ResultsPRV is distantly related to members of the genera Orthoreovirus and Aquareovirus and an unambiguous new genus within the family Reoviridae. The Canadian and Norwegian PRV strains are most divergent in the segment S1 and S4 encoded proteins. Phylogenetic analysis of PRV S1 sequences, for which the largest number of complete sequences from different “isolates” is available, grouped Norwegian PRV strains into a single genotype, Genotype I, with sub-genotypes, Ia and Ib. The Canadian PRV strains matched sub-genotype Ia and Chilean PRV strains matched sub-genotype Ib.ConclusionsPRV should be considered as a member of a new genus within the family Reoviridae with two major Norwegian sub-genotypes. The Canadian PRV diverged from Norwegian sub-genotype Ia around 2007 ± 1, whereas the Chilean PRV diverged from Norwegian sub-genotype Ib around 2008 ± 1.