SummaryHorses, like many domesticated species, have been selected for broad variation in skeletal size. This variation is not only an interesting model of rapid evolutionary change during domestication, but is also directly applicable to the horse industry. Breeders select for complex traits like body size and skeletal conformation to improve marketability, function, soundness and performance in the show ring. Using a well-defined set of 35 measurements, we have identified and quantified skeletal variation in the horse species. We collected measurements from 1215 horses representing 65 breeds of diverse conformation such as the American Miniature, Shetland Pony, Arabian Horse, Thoroughbred, Shire and Clydesdale. Principal components analysis has identified two key dimensions of skeletal variation in the horse. Principal component 1 is positively correlated with every measurement and quantifies overall body size. Principal component 2 captures a pattern of bone widths vs. lengths and thus quantifies variation in overall bone thickness. By defining these complex skeletal traits, we have created a framework for whole genome association studies to identify quantitative trait loci that contribute to this variation.

Mycoplasma gallisepticum has been isolated from various species of free-living birds, and we therefore tested the hypothesis that bird species other than the main host, the house finch (Carpodacus mexicanus), could play a role in the epidemiology of the infection. We compared the disease course in the house finch, American goldfinch (Carduelis tristis) and house sparrow (Passer domesticus) after inoculation into the conjunctival sac with M. gallisepticum, and also the degree to which the three species were infectious to other naive house finches. Severity of clinical signs was least in house sparrows, intermediate in American goldfinch and the highest in house finch. House sparrows were only mildly infectious to naive house finches for a short time, whereas American goldfinches remained infectious for up to 49 days post inoculation, although by then there were no physical signs of disease. We conclude that since American goldfinches can be infectious without showing any conjunctivitis, and since they often make long-distance movements, they might play an as yet unsuspected but important role in M. gallisepticum dynamics in house finches.

We isolated and characterized 33 novel, polymorphic microsatellite loci from the social sponge-dwelling snapping shrimp Zuzalpheus brooksi. We screened all 33 loci in approximately 31 individuals from a population of Z. brooksi from the Florida Keys, USA and found an average of 16 alleles per locus. Approximately 25% of the loci showed more than two bands per individual, suggesting evidence of high gene duplication, or more likely, polyploidy, which is common in crustaceans. The 25 disomic loci had an observed heterozygosity of 0.57 (range = 0.03-1.00) and will be useful for studying the social organization in Zuzalpheus shrimp.

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