R67 dihydrofolate reductase (DHFR) is an R-plasmid encoded protein that confers clinical resistance to the antibacterial drug trimethoprim. To determine whether an acidic titration in kinetic pH profiles is related to titration of histidines 62, 162, 262, and 362, the stability of tetrameric R67 DHFR has been monitored as a function of pH. For the pH range 5-8, tetrameric R67 DHFR reversibly dissociates into dimers, as monitored by ultracentrifugation and molecular sieving techniques. From the crystal structures of dimeric and tetrameric R67 DHFR [Matthews et al. (1986) Biochemistry 25, 4194-4204] (Narayana, Matthews, and Xuong, personal communication), symmetry-related histidines 62, 162, 262, and 362 occur at the two dimer-dimer interfaces and protonation of these residues could destabilize tetrameric R67 DHFR. Ionization of these histidines was confirmed by monitoring the chemical shifts of the C2 proton in NMR experiments, and best fits of an incomplete titration curve yield a pKa of 6.77. Since tryptophans 38, 138, 238, and 338 also occur at the dimer-dimer interfaces, fluorescence additionally monitors the tetramer-two dimers equilibrium. When fluorescence was monitored over the pH range 5-8, a protein concentration dependence of fluorescence was observed and global fitting of three titration curves yielded Kd = 9.72 nM and pKa = 6.84 for the linked reactions: [formula: see text] Modification of H62, H162, H262, and H362 by diethyl pyrocarbonate stabilizes dimeric R67 DHFR and causes a 200-600-fold decrease in catalytic efficiency. Decreased catalytic activity in dimeric R67 DHFR is presumably due to loss of the putative single active site pore found in tetrameric R67 DHFR.
Enhanced oil recovery
(EOR) using nanofluids has been proposed
in recent years, but the mechanism of oil recovery enhancement through
nanofluid injection still needs further study. In this study, the
pore-scale performance and mechanism of nanofluid EOR were investigated
based on a micromodel experiment. The micromodel sample was designed
to compare the silica-based homogeneous water-wet sandstone reservoirs. The behavior of 0.1% wt water-base
silica nanofluid-displacing oil (dodecane) was compared to the deionized
(DI) water-displacing case. Residual oil saturation gradually decreases
from 50% to 43% as the DI water injection flow rate increases from
0.5 to 5.0 μL/min. In the nanofluid-injection case, residual
oil saturation decreases from 24% to 20% as the flow rate varies in
the same range. About 25% saturation of incremental oil recovery is
obtained by nanofluid injection compared to DI water injection. This
implies significant improvement in oil recovery performance from nanofluid
injection. Through investigation of detailed pore-scale fluid distribution,
the wettability alteration of the oil-bearing pore wall from a strongly
water-wet condition to the neutrally wet condition is observed in
the presence of nanoparticles. The wettability alteration behavior
in a natural sandstone sample was investigated via a spontaneous imbibition
test. The imbibition rate slows down significantly in the presence
of nanoparticles indicating that the wettability alteration mechanism
observed in the micromodel experiment is also valid in the case of
natural water-wet sandstones and consequently can enhance the oil
recovery. The analysis based on Wenzel’s model indicates that
the nanoparticle adsorption-induced nonuniform pore wall roughness
change is the possible mechanism for wettability alteration.
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