In recent years, lipids have come to the foreground as signaling mediators in the central nervous system (CNS) 1,2 . While classical neurotransmitters are stored in synaptic vesicles and released on fusion with the plasma membrane of neurons, due to their lipophilic nature, lipids readily diffuse through membranes and are not stored in vesicles. It is, therefore, generally accepted that signaling lipids are produced 'on demand' and are rapidly metabolized to terminate their biological action 3 . In particular, NAEs, including N-palmitoylethanolamine (PEA), N-oleoylethanolamine (OEA) and the endocannabinoid anandamide (N-arachidonoylethanolamine, AEA) have emerged as key lipid signaling molecules. Genetic deletion or pharmacological inhibition of the main NAE hydrolytic enzyme, fatty acid amide hydrolase (FAAH), revealed elevated anandamide, PEA and OEA levels in brain and implicated these molecules in the modulation of various physiological processes such as pain, stress, anxiety, appetite, cardiovascular function and inflammation [4][5][6][7] . The physiological effects resulting from perturbation of the production of anandamide and other NAEs in living systems are, however, poorly studied, partly because of a lack of pharmacological tools to modulate their biosynthetic enzymes 8 . NAPE-PLD is generally considered a principal NAE biosynthetic enzyme 9,10 . Biochemical and structural studies have demonstrated that NAPE-PLD is a membrane-associated, constitutively active zinc hydrolase with a metallo-β-lactamase fold 11 . The enzyme generates a broad range of NAEs by hydrolysis of the phosphodiester bond between the phosphoglyceride and the NAE in N-acylphosphatidylethanolamines (NAPEs) 12 . Knockout (KO) studies have shown that the Ca 2+ -dependent conversion of NAPE to NAEs bearing both saturated and polyunsaturated fatty acyl groups are fivefold reduced in brain lysates from mice that genetically lack Napepld 13 . In accordance, reduced levels of saturated and mono-unsaturated NAEs were observed in the brains of NAPE-PLD KO mice [13][14][15] . Anandamide levels were not reduced in the transgenic model reported by Leung et al., which suggested the presence of compensatory mechanisms 13 . Indeed, multiple alternative biosynthetic pathways for anandamide have been discovered since 10 .

Phenotypic screening is a powerful approach to identify novel antibiotics, but elucidation of the targets responsible for the antimicrobial activity is often challenging in the case of compounds with a polypharmacological mode of action. Here, we show that activity-based protein profiling maps the target interaction landscape of a series of 1,3,4-oxadiazole-3-ones identified in a phenotypic screen to have high antibacterial potency against multidrug-resistant Staphylococcus aureus. In situ competitive and comparative chemical proteomics with a tailor-made activity-based probe, in combination with transposon and resistance studies, revealed several cysteine and serine hydrolases as relevant targets. Our data showcase oxadiazolones as a novel antibacterial chemotype with a polypharmacological mode of action, in which FabH, FphC, and AdhE play a central role.

Multidrug-resistant bacteria pose a serious global health threat as antibiotics are increasingly losing their clinical efficacy. A molecular level understanding of the mechanism of action of antimicrobials plays a key role in developing new agents to combat the threat of antimicrobial resistance. Daptomycin, the only clinically used calcium-dependent lipopeptide antibiotic, selectively disrupts Gram-positive bacterial membranes to illicit its bactericidal effect. In this study, we use isothermal titration calorimetry to further characterize the structural features of the target bacterial phospholipids that drive daptomycin binding. Our studies reveal that daptomycin shows a clear preference for the phosphoglycerol headgroup. Furthermore, unlike other calcium-dependent lipopeptide antibiotics, calcium binding by daptomycin is strongly dependent on the presence of phosphatidylglycerol. These investigations provide new insights into daptomycin’s phospholipid specificity and calcium binding behavior.

The increasing prevalence of metallo‐β‐lactamase (MBL)‐expressing bacteria presents a worrying trend in antibiotic resistance. MBLs rely on active site zinc ions for their hydrolytic activity and the pursuit of MBL‐inhibitors has therefore involved the investigation of zinc chelators. To ensure that such chelators specifically target MBLs, a series of cephalosporin prodrugs of two potent zinc‐binders: dipicolinic acid (DPA) and 8‐thioquinoline (8‐TQ) was prepared. Although both DPA and 8‐TQ bind free zinc very tightly (Kd values in the low nm range), the corresponding cephalosporin conjugates do not. The cephalosporin conjugates are efficiently hydrolyzed by MBLs to release DPA or 8‐TQ, as confirmed by using both NMR and LC‐MS studies. Notably, the cephalosporin prodrugs of DPA and 8‐TQ show potent inhibitory activity against NDM, VIM, and IMP classes of MBLs and display potent synergy with meropenem against MBL‐expressing clinical isolates of K. pneumoniae and E. coli.

With increasing rates of resistance toward commonly used antibiotics, especially among Gram-negative bacteria, there is renewed interested in polymyxins. Polymyxins are lipopeptide antibiotics with potent anti-Gram-negative activity and are generally believed to target lipid A, the lipopolysaccharide (LPS) anchor found in the outer membrane of Gram-negative bacteria. To characterize the stereochemical aspects of their mechanism(s) of action, we synthesized the full enantiomers of polymyxin B and the polymyxin B nonapeptide (PMBN). Both compounds were compared with the natural compounds in biological and biophysical assays, revealing strongly reduced antibacterial activity for the enantiomeric species. The enantiomeric compounds also exhibit reduced LPS binding, lower outer membrane (OM) permeabilization, and loss of synergetic potential. These findings provide new insights into the stereochemical requirements underlying the mechanisms of action of polymyxin B and PMBN.