Detection of receptor-ligand interactions is generally accomplished by indirect assays such as enzyme-linked immunosorbent assay. A direct colorimetric detection method based on a polydiacetylene bilayer assembled on glass microscope slides has been developed. The bilayer is composed of a self-assembled monolayer of octadecylsilane and a Langmuir-Blodgett monolayer of polydiacetylene. The polydiacetylene layer is functionalized with an analog of sialic acid, the receptor-specific ligand for the influenza virus hemagglutinin. The sialic acid ligand serves as a molecular recognition element and the conjugated polymer backbone signals binding at the surface by a chromatic transition. The color transition is readily visible to the naked eye as a blue to red color change and can be quantified by visible absorption spectroscopy. Direct colorimetric detection by polydiacetylene films offers new possibilities for diagnostic applications and screening for new drug candidates or binding ligands.

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Polymerized thin films based on polydiacetylenes (PDAs) undergo distinct color transitions that lend themselves to applications in biosensing, surface modification, nonlinear optics, and molecular electronics. The mechanism of the thermochromic blue to red color transition of PDA thin films was investigated at the molecular level using atomic force microscopy and at the macroscopic level with visible absorption and Fourier transform infrared spectroscopy. The thermochromic transition temperature is found to be between 70 and 90°C. At the molecular level, the ordering of the film increases at the thermochromic transition and remains ordered up to temperatures well above the transition (e.g., 130°C). No evidence for previously suggested entanglement or disordering of the alkyl side chains is observed. The pendant side chains rearrange from a partially disordered configuration characteristic of the blue film, to a well-ordered closepacked hexagonal arrangement in the red form. The rearrangment of the pendant side chains is linked to the formation of the red phase PDA.

Polydiacetylenic lipid membranes offer a general 'litmus test' for molecular recognition at the surface of a membrane. A concentration of 20 ppm of protein could be detected using polymerized thin films. The speed, sensitivity and simplicity of the design offers a new and general approach towards the direct colorimetric detection of a variety of different molecules.