We present parallel algorithms to efficiently permute a sorted array into the level-order binary search tree (BST), level-order B-tree (B-tree), and van Emde Boas (vEB) layouts in-place. We analytically determine the complexity of our algorithms and empirically measure their performance. Given N elements and P processors, our fastest algorithms have a parallel runtime of O N P for the BST layout, O N P + log B N log B N for the B-tree layout, and O N P log log N for the vEB layout using the CREW Parallel Random Access Machine (PRAM) model. Experimental results indicate that on both CPU and GPU architectures, the B-tree layout provides the best query performance. However, when considering the total time to permute the data using our algorithms and to perform a series of search queries, the vEB layout provides the best performance on the CPU. We show that given an input of N=500M 64-bit integers, the benefits of query performance (compared to binary search) outweigh the cost of in-place permutation using our algorithms when performing at least 5M queries (1% of N) and 27M queries (6% of N), on our CPU and GPU platforms, respectively.

The high computational throughput of modern graphics processing units (GPUs) make them the de-facto architecture for high-performance computing applications. However, to achieve peak performance, GPUs require highly parallel workloads, as well as memory access patterns that exhibit good locality of reference. As a result, many state-of-the-art algorithms and data structures designed for GPUs sacrifice work-optimality to achieve the necessary parallelism. Furthermore, some abstract data types are avoided completely due to there being no corresponding data structure that performs well on the GPU. One such abstract data type is the priority queue.Many well-known algorithms rely on priority queue operations as a building block. While various priority queue structures have been developed that are parallel, cache-aware, or cache-oblivious, none has been shown to be efficient on GPUs. In this paper, we present the parBucketHeap, a parallel, cache-efficient data structure designed for modern GPU architectures that supports standard priority queue operations, as well as bulk update. We analyze the structure in several well-known computational models and show that it provides both optimal parallelism and is cache-efficient. We implement the parBucketHeap and, using it, we solve the single-source shortest path (SSSP) problem. Experimental results indicate that, for sufficiently large, dense graphs with high diameter, we out-perform current state-of-the-art SSSP algorithms on the GPU by up to a factor of 5. Unlike existing GPU SSSP algorithms, our approach is work-optimal and places significantly less load on the GPU, reducing power consumption.

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