European Union FP7, Royal Society, and National Science Foundation.

The presence and permanence of several serotypes of dengue virus circulating at the same time is due to other factors influencing the virus behavior and variability of the four serotypes. The molecular surveillance of the circulating serotypes, genotypes and dengue virus lineages should be strengthened.

In order to gain insight into the genetic variability of dengue virus type 3 (DENV-3) genotype III isolated in the Latin American region, phylogenetic analysis were carried out using envelope (E) gene sequences from 57 DENV-3 genotype III strains isolated in 11 Latin American countries. At least six different genotype III clades were observed. Amino acids substitutions were found in domain III E protein neutralization epitopes and in surface-exposed domain II and III E protein amino acid sequences.

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