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Ecosystem degradation due to anthropogenic activities is the primary issue of our times. Theoretical analyses as well as efforts to restore and manage ecosystems depend on comprehensive metrics of ecosystem function. In the case of complex ecosystems such as tropical coral reefs-especially where monitoring, management, and restoration are important-multiple metrics reflecting key functional groups are required to accurately reflect ecosystem function and when necessary, diagnose degree and kind of ecosystem degradation. We propose inclusion of the generalist ectoparasite functional group as a measure of ecosystem function of coral reefs. This functional group is adaptable to loss of other community members and may experience an increase in abundance as ecosystem function declines. Fish-parasitic gnathiid isopods are a member of this group, resident though inconspicuous in coral-reef communities. On Caribbean coral reefs, based on 938 light-trap samples, we observed a negative correlation between abundance of smallersized gnathiids and abundance of live coral, a natural predator of gnathiids. Plots grouped by coral cover-a measure of success of the ecosystem engineer-and ectoparasite abundance varied significantly in community composition including abundance of macroalgae, turf algae, and farming Stegastes spp. damselfish reflecting shifts in community structure. Changes in gnathiid abundance with respect to the abundance of organisms participating in each of the core functional processes driving coral-reef ecosystems reflect broad connectivity of gnathiid parasites across the ecosystem. We conclude that the hyperabundance of a small, cryptic, generalist parasite, when used in combination with a metric of abundance of the primary ecosystem engineer, can provide one nuanced measure of the ecosystem vulnerability to collapse.

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Acanthurids (surgeonfishes) are an abundant and diverse group of herbivorous fishes on coral reefs. While their contribution to trophic linkages and dynamics in coral reef systems has received considerable attention, the role of linkages involving their parasites has not. As both consumers of fish tissue and prey to microcarnivores, external parasites may play a significant role in trophic transfer between primary consumers (and hence their predominantly algae-based diet) and the broader coral reef community. Stable isotope analysis is a common tool for studying trophic linkages which can be used for studies involving parasites. We examined the stable isotope ecology (13C and 15N) of copepod (Caligus atromaculatus) and monogenean (Neobenedenia sp.) ectoparasites collected from two species of Caribbean acanthurids (Acanthurus coeruleus and Acanthurus bahianus). There were significant intraspecific differences in isotope discrimination factors between parasites collected from the two different host species as well as interspecific differences between parasites collected from the same host species. Discrimination factors for 15N were consistently positive but varied in magnitude depending on host and parasite species and were slightly lower than what would be expected for consumers. The 13C discrimination factors for both monogeneans and copepods collected from A. coeruleus were consistently positive but were negative for copepods collected from A. bahianus. These findings emphasize the complexity of the stable isotope trophic interactions occurring between parasites and their hosts, highlighting the value of these types of host-parasite isotopic studies.