In contrast to cytoplasmic localization of spliced mRNAs, many spliced lncRNAs are localized in the nucleus. To investigate the mechanism, we used lncRNA MEG3 as a reporter and mapped a potent nuclear retention element (NRE), deletion of this element led to striking export of MEG3 from the nucleus to the cytoplasm. Insertion of the NRE resulted in nuclear retention of spliced lncRNA as well as spliced mRNA. We further purified RNP assembled on the NRE in vitro and identified the proteins by mass spectrometry. Screen using siRNA revealed depletion of U1 snRNP components SNRPA, SNRNP70 or SNRPD2 caused significant cytoplasmic localization of MEG3 reporter transcripts. Co-knockdown these factors in HFF1 cells resulted in an increased cytoplasmic distribution of endogenous lncRNAs. Together, these data support a model that U1 snRNP components restrain spliced lncRNAs in the nucleus via the interaction with nuclear retention element.
This study investigated the fluoride (F) concentrations and physicochemical parameters of the groundwater in a fluorite mining area of the flood plain region of the River Swat, with particular emphasis on the fate and distribution of F and the hydrogeochemistry. To better understand the groundwater hydrochemical profile and F enrichment, groundwater samples (n=53) were collected from shallow (24-40m), mid-depth (48-65m) and deep (85-120m) aquifers, and then analysed using an ion-selective electrode. The lowest F concentration (0.7mg/L) was recorded in the deep-aquifer groundwater, while the highest (6.4mg/L) was recorded in shallow groundwater. Most groundwater samples (62.2%) exceeded the guideline (1.5mg/L) set by the World Health Organization (WHO); while for individual sources, 73% of shallow-groundwater samples (F concentration up to 6.4mg/L), 42% of mid-depth-groundwater samples, and 17% of deep-groundwater samples had F concentrations that exceeded this permissible limit. Assessment of the overall quality of the groundwater revealed influences of the weathering of granite and gneisses rocks, along with silicate minerals and ion exchange processes. Hydrogeochemical analysis of the groundwater showed that Na is the dominant cation and HCO the major anion. The anionic and cationic concentrations across the entire study area increased in the following order: HCO>SO>Cl>NO>F>PO and Na>Ca>Mg>K, respectively. Relatively higher F toxicity levels were associated with the NaHCO water type, and the chemical facies were found to change from the CaHCO to (NaHCO) type in calcium-poor aquifers. Thermodynamic considerations of saturation indices indicated that fluorite minerals play a vital role in the prevalence of fluorosis, while under-saturation revealed that - besides fluorite minerals - other F minerals that are also present in the region further increase the F concentrations in the groundwater. Finally, a health risk assessment via Dean's classification method identified that the groundwater with relatively higher F concentrations is unfit for drinking purposes.
Paulownia tomentosa, a woody plant that is widely found in Pakistan and in other regions of the world, was used as a raw material to prepare activated carbon using chemical and physical activation methods. Adsorption of the dyes- acid red 4 and methylene blue onto the prepared activated carbon were analyzed by batch experiments. The impacts of different adsorption parameters such as pH, temperature, contact time, initial dye concentration and adsorbent dosage were also evaluated. Equilibrium data were fitted into various isotherm models such as: Langmuir, Temkin and Freundlich. High regression values were achieved with Langmuir isotherm model. Different kinetic adsorption models such as pseudo-first-order, pseudo-second-order and intra-particle diffusion model models were applied. The adsorption kinetics was found to be best-fitted into pseudo-second-order kinetic model. The optimum pH for acid red 4 was around 1 while for methylene blue it was 8. The optimum adsorbent dosage was 0.3 g for both dyes used. The activation energy (Ea) values were 30.57 and 3.712 kJ/mol, respectively for acid red 4 and methylene blue while the enthalpy (ΔH) and entropy (ΔS) values were correspondingly as 24.88/1.1927 kJ/mol and −2843.32/−0.329 J·mol/K for the mentioned dyes. The experimental result showed that the prepared activated carbon was the best in the removal of acid red 4 and methylene blue from aqueous media and therefore, could be preferably used as cheap adsorbent in wastewater treatment.
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