A significant knowledge gap exists concerning the geographical distribution of nontuberculous mycobacteria (NTM) isolation worldwide.To provide a snapshot of NTM species distribution, global partners in the NTM-Network European Trials Group (NET) framework (www.ntm-net.org), a branch of the Tuberculosis Network European Trials Group (TB-NET), provided identification results of the total number of patients in 2008 in whom NTM were isolated from pulmonary samples. From these data, we visualised the relative distribution of the different NTM found per continent and per country.We received species identification data for 20 182 patients, from 62 laboratories in 30 countries across six continents. 91 different NTM species were isolated. Mycobacterium avium complex (MAC) bacteria predominated in most countries, followed by M. gordonae and M. xenopi. Important differences in geographical distribution of MAC species as well as M. xenopi, M. kansasii and rapid-growing mycobacteria were observed.This snapshot demonstrates that the species distribution among NTM isolates from pulmonary specimens in the year 2008 differed by continent and differed by country within these continents. These differences in species distribution may partly determine the frequency and manifestations of pulmonary NTM disease in each geographical location. @ERSpublications Species distribution among nontuberculous mycobacteria isolates from pulmonary specimens is geographically diverse
There is no standard method for the diagnosis of prosthetic joint infection (PJI). The contribution of 16S rRNA gene PCR sequencing on a routine basis remains to be defined. We performed a prospective multicenter study to assess the contributions of 16S rRNA gene assays in PJI diagnosis. Over a 2-year period, all patients suspected to have PJIs and a few uninfected patients undergoing primary arthroplasty (control group) were included.
Drug-resistant strains of Mycobacterium tuberculosis, though not a novel phenomenon, are emerging worldwide. According to the latest figures of the World Health Organization and the International Union against Tuberculosis and Lung Diseases, drug resistance, in particular acquired resistance, has poured additional fuel on the fire of global tuberculosis (TB) (18). Several outbreaks of multidrug-resistant TB (7) were characterized by delayed diagnoses, inadequate treatment regimens, high rates of mortality, and significant rates of transmission and have taught us two lessons: first, the days are definitely gone where full susceptibility of TB bacilli to front-line drugs can be taken for granted. Second, rapid detection of drug resistance is paramount, not only for effective treatment of TB patients but also for initiating adequate public health measures.In the quest for new nonradiometric, culture-based strategies which allow both rapid detection of acid-fast bacilli and testing of susceptibility to antimicrobial agents, new liquid medium-based systems, such as the MB/BacT (Organon-Teknika, Durham, N.C.), ESP Culture System II (AccuMed International, Westlake, Ohio), MB Redox (Biotest, Dreieich, Germany), and the Mycobacteria Growth Indicator Tube 960 (MGIT 960, Becton Dickinson Microbiology Systems, Sparks, Md.), have become available. They all aim not only at recovering mycobacteria from clinical specimens but also at generating antimicrobial susceptibility testing (AST) data with a shorter turnaround time than that observed with the current "gold standard," the agar proportion method (11). The performance of a new system should be comparable with that of the BACTEC 460 TB system, with elimination of the two core problems associated with the old BACTEC 460 TB technology, i.e., the risk of needle punctures and disposal of radioactive waste. Preliminary studies utilizing those new systems report good overall agreement of AST results with those generated with established methods (1, 3-5, 8, 10, 12-13, 15).Recent automation of the MGIT 960 technology was another step forward, as it allows continuous monitoring of positive fluorescence, which is based on bacterial growth. It is noninvasive and eliminates potential reading difficulties during visual judging of the tubes, apart from saving labor. The threshold algorithms help in determining the susceptibility automatically.In this multicenter study we have evaluated the reproducibility and reliability of the BACTEC MGIT 960 instrument for testing of M. tuberculosis susceptibility to isoniazid (INH), rifampin (RIF) ethambutol (EMB), and streptomycin (STR) and have compared the results to those obtained by the radiometric procedure. Discordant results were resolved by testing the strains with the agar proportion method using Löwenstein-Jensen (LJ) medium (6). This was done by an additional site which thus acted as an independent arbiter. Last, in order to address safety, we performed drug susceptibility testing in plastic MGITs, in addition to the glass tubes.
h Although numerous perioperative samples and culture media are required to diagnose prosthetic joint infection (PJI), their exact number and types have not yet been definitely determined with a high level of proof. We conducted a prospective multicenter study to determine the minimal number of samples and culture media required for accurate diagnosis of PJI. Over a 2-year period, consecutive patients with clinical signs suggesting PJI were included, with five perioperative samples per patient. The bacteriological and PJI diagnosis criteria were assessed using a random selection of two, three, or four samples and compared with those obtained using the recommended five samples (references guidelines). The results obtained with two or three culture media were then compared with those obtained with five culture media for both criteria. The times-to-positivity of the different culture media were calculated. PJI was confirmed in 215/264 suspected cases, with a bacteriological criterion in 192 (89%). The PJI was monomicrobial (85%) or polymicrobial (15%). Percentages of agreement of 98.1% and 99.7%, respectively, for the bacteriological criterion and confirmed PJI diagnosis were obtained when four perioperative samples were considered. The highest percentages of agreement were obtained with the association of three culture media, a blood culture bottle, a chocolate agar plate, and Schaedler broth, incubated for 5, 7, and 14 days, respectively. This new procedure leads to significant cost saving. Our prospective multicenter study showed that four samples seeded on three culture media are sufficient for diagnosing PJI. There is still no standard definition of prosthetic joint infection (PJI). Although numerous perioperative samples are needed to diagnose PJI, their optimal number is not yet definitively known. In 1998, Atkins et al., using a mathematical model, demonstrated that five or six perioperative samples, with a cutoff of three or more culture-positive samples, are needed to diagnose PJI with high sensitivity and specificity (1). Recent guidelines still recommend that about five samples should be cultured for optimal diagnosis of PJI (2, 3). Since each tissue specimen is cultured on four to five culture media, a total of 20 to 25 culture media have to be analyzed per patient. The optimal duration of incubation for periprosthetic cultures was extended to 13 or 14 days, especially for Propionibacterium acnes recovery (4, 5). The implementation of 14-day culture incubation in combination with the use of multiple solid and liquid aerobic and anaerobic culture media makes the daily monitoring of PJI by the laboratory very complex, costly, and time-consuming. Moreover, the number of cases of PJI will continue to increase in the coming decades. Forecasts predict that by 2030, the demand for total hip and knee arthroplasties will grow to 4 million in the United States (6). A major economic effect is that device-associated costs are significantly higher than native bone and joint infections, as recently reported (7). Thi...
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