The Pseudomonas genus, which includes environmental and pathogenic species, is known to present antibiotic resistances, and can receive resistance genes from multi-resistant enteric bacteria released into the environment via faecal rejects. This study was aimed to investigate the resistome of Pseudomonas populations that have been in contact with these faecal bacteria. Thus, faecal discharges originating from human or cattle were sampled (from 12 points and two sampling campaigns) and 41 Pseudomonas species identified (316 isolates studied). The resistance phenotype to 25 antibiotics was determined in all isolates, and we propose a specific antibiotic resistance pattern for 14 species (from 2 to 9 resistances). None showed resistance to aminoglycosides, tetracycline, or polymyxins. Four species carried a very low number of resistances, with none to β-lactams. Interestingly, we observed the absence of the transcriptional activator soxR gene in these four species. No plasmid transfer was highlighted by conjugation assays, and a few class 1 but no class 2 integrons were detected in strains that may have received resistance genes from Enterobacteria. These results imply that the contribution of the Pseudomonas genus to the resistome of an ecosystem first depends on the structure of the Pseudomonas populations, as they may have very different resistance profiles.
Legumes provide multiple ecosystem services in agricultural systems. The objectives of this study were to evaluate the influence of different legumes through C rhizodeposition on the dynamics of C, N and P in soil and on microbial communities’ resource requirements. Legumes pea (Pisum sativum L.), faba bean (Vicia faba L.), white clover (Trifolium repens L.), crimson clover (Trifolium incarnatum L.) and non-legume wheat (Triticum aestivum L.) were grown in pots. Carbon rhizodeposition was quantified by using 13CO2 labeling, and six soil enzyme activities were measured: β-glucosidase (BG), arylamidase (ARYLN), N-acetyl-glucosaminidase (NAG), phosphatases (PHO) and alkaline and acid phosphatases (AKP and ACP). Enzyme stoichiometry approaches were applied. The results showed that BG, NAG and ACP activities were positively influenced by faba bean and clovers. Enzyme stoichiometry analysis revealed a limitation of microorganisms in C and P resources at the plant reproductive stage. These results were explained by plant functional traits. Plant biomass production, root total length, the ability of plants to rhizodeposit C and the C and N content of plant tissues were the main explicative factors. This study also shows that N and C nutrient supplies positively contribute to nutritional requirements and the growth of microorganisms and P availability in soil.
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