Automated annotation of protein function is challenging. As the number of sequenced genomes rapidly grows, the overwhelming majority of protein products can only be annotated computationally. If computational predictions are to be relied upon, it is crucial that the accuracy of these methods be high. Here we report the results from the first large-scale community-based Critical Assessment of protein Function Annotation (CAFA) experiment. Fifty-four methods representing the state-of-the-art for protein function prediction were evaluated on a target set of 866 proteins from eleven organisms. Two findings stand out: (i) today’s best protein function prediction algorithms significantly outperformed widely-used first-generation methods, with large gains on all types of targets; and (ii) although the top methods perform well enough to guide experiments, there is significant need for improvement of currently available tools.
Object detection, as of one the most fundamental and challenging problems in computer vision, has received great attention in recent years. Its development in the past two decades can be regarded as an epitome of computer vision history. If we think of today's object detection as a technical aesthetics under the power of deep learning, then turning back the clock 20 years we would witness the wisdom of cold weapon era. This paper extensively reviews 400+ papers of object detection in the light of its technical evolution, spanning over a quarter-century's time (from the 1990s to 2019). A number of topics have been covered in this paper, including the milestone detectors in history, detection datasets, metrics, fundamental building blocks of the detection system, speed up techniques, and the recent state of the art detection methods. This paper also reviews some important detection applications, such as pedestrian detection, face detection, text detection, etc, and makes an in-deep analysis of their challenges as well as technical improvements in recent years.
Given the challenge of gathering labeled training data, zero-shot classification, which transfers information from observed classes to recognize unseen classes, has become increasingly popular in the computer vision community. Most existing zero-shot learning methods require a user to first provide a set of semantic visual attributes for each class as side information before applying a two-step prediction procedure that introduces an intermediate attribute prediction problem. In this paper, we propose a novel zeroshot classification approach that automatically learns label embeddings from the input data in a semi-supervised large-margin learning framework. The proposed framework jointly considers multi-class classification over all classes (observed and unseen) and tackles the target prediction problem directly without introducing intermediate prediction problems. It also has the capacity to incorporate semantic label information from different sources when available. To evaluate the proposed approach, we conduct experiments on standard zero-shot data sets. The empirical results show the proposed approach outperforms existing state-of-the-art zero-shot learning methods.
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