We describe structural studies carried out with some basic proteins found in association with DNA in the spermatozoa of molluscs and echinoderms. We have studied proteins related to histone H1 as well as protamines. Structural prediction methods show that these proteins have a strong helical potential and contain several turns, mainly of the SPKK type. No p structures were found.Strong structural similarities have been detected between distantly related species. The presence of helical regions is confirmed by circular dichroism in trifluoroethanol solution. The influence of the SPKK turns is also evident in the CD spectra. In proteins which contain a high percentage of arginine we conclude that conventional prediction methods should be modified in order to allow for a higher helical potential for this amino acid residue. Synthetic peptides with a sequence present in the C-terminal region of histone H1 have also been studied. It was found that octapeptides may only acquire a small amount of structure, whereas hexadecapeptides are 50-60% helical. These studies strongly suggest that both protamines and proteins related to the C-terminal part of histone H1 interact with DNA mainly in the a-helical conformation.The basic proteins associated with DNA in the nuclei of spermatozoa show a wide range of variation in number of components, amino acid composition and size, as reviewed elsewhere [l]. In some cases a complete set of somatic histones may be found, whereas in other cases histones have been completely substituted by one or several arginine-rich proteins (protamines). In some species intermediate proteins are found. In this paper we analyze the secondary structure of several sperm proteins which appear to be related to histone H1 and compare their structure with protamines.It is known [2] that histone H1 is involved in the formation of the higher-order structure of chromatin fibers. It has also been shown that this histone has three clearly defined structural domains [3]. Later it was found [4-61 that the Cterminal domain of this histone, which is rich in Lys, Ala and Pro, has regions with a high helical potential, in particular in histone H1 from sea urchin spermatozoa. Models have been proposed [7-91 in order to explain how these helical regions might stabilize the higher-order structure of DNA.Recently we have shown [lo] that chromatin fibers may be formed in mollusc spermatids and spermatozoa in the presence of protamines and H1-related proteins, but with a very low content of core histones. In organisms in which only arginine-rich protamines are present, no chromatin fibres are found, but instead the nucleus is very compact [ l l ] and the nucleoprotamine complex is a highly ordered system of parallel DNA molecules [12]. One of us has recently sug- gested that protamines may also stabilize this complex in a helical conformation [7, 81. In view of this situation and due to the fact that the sequence of some of these proteins has been recently determined [13, 141, we decided to study the structural properties...