Fuel cells are electrochemical devices that convert the chemical energy stored in fuels (hydrogen for polymer electrolyte membrane (PEM) fuel cells) directly into electricity with high efficiency. Fuel cells are already commercially used in different applications, and significant research efforts are being carried out to further improve their performance and durability and to reduce costs. Experimental testing of fuel cells is a fundamental research activity used to assess all the issues indicated above. The current work presents original data corresponding to the experimental analysis of the performance of a 50 cm2 PEM fuel cell, including experimental results from a load cycling dedicated test. The experimental data were acquired using a dedicated test bench following the harmonized testing protocols defined by the Joint Research Centre (JRC) of the European Commission for automotive applications. With the presented dataset, we aim to provide a transparent collection of experimental data from PEM fuel cell testing that can contribute to enhanced reusability for further research.