Nocardia caishijiensis sp. nov., a novel soil actinomycete

Zhang, Jianli; Liu, Zhiheng; Goodfellow, Michael

doi:10.1099/ijs.0.02397-0

Cited by 34 publications

(27 citation statements)

References 44 publications

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“…The test strain was also examined for a range of phenotypic properties according to procedures described in previous studies (Lacey & Goodfellow, 1975;Lu et al, 2001;Zhang et al, 2003). Acid production from carbohydrates was assessed using media and methods described by Gordon et al (1974) and the utilization of sole carbon sources was determined after Gordon & Mihm (1957).…”

Section: Strain 88mentioning

confidence: 99%

Saccharopolyspora shandongensis sp. nov., isolated from wheat-field soil

Zhang

et al. 2008

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLO

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Section: Strain 88mentioning

confidence: 99%

Saccharopolyspora shandongensis sp. nov., isolated from wheat-field soil

Zhang

et al. 2008

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLO

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“…Phenotypic characteristics that distinguish strains 117 T and 43401 T from one another and from the type strains of phylogenetically close Nocardia species Strains: 1, strain 117 T ; 2, strain 43401 T ; 3, Nocardia abscessus DSM 44432 T ; 4, Nocardia africana DSM 44491 T ; 5, Nocardia asteroides ATCC 19247 T ; 6, Nocardia crassostreae ATCC 700418 T ; 7, N. nova JCM 6044 T ; 8, Nocardia otitidiscaviarum NCTC 1934 T ; 9, N. pseudobrasiliensis ATCC 51512 T ; 10, Nocardia transvalensis DSM 43405 T ; 11, Nocardia vaccinii DSM 43285 T ; 12, Nocardia vinacea JCM 10988 T ; 13, Nocardia xishanensis CGMCC 4.1860 T . Data were taken from this study and previous studies (Yassin et al, 2000b(Yassin et al, , 2001bAlbuquerque de Barros et al, 2003;Zhang et al, 2003Zhang et al, , 2004. +, Positive; 2, negative; d, doubtful; ND, not determined.…”

Section: Description Of Nocardia Jiangxiensis Sp Novmentioning

confidence: 99%

“…Oatmeal agar adjusted to initial pH values of 3?5, 4?5, 5?5, 6?5, 7?5, 8?5, 9?5 and 10?5 using citric acid (0?1 M)/ Na 2 HPO 4 (0?2 M) and glycine (0?05 M)/NaOH (0?05 M) buffer systems was used to test the ability of strains to grow at different pHs. The chemotaxonomic properties of the isolates were determined by following standard chromatographic procedures as outlined by Zhang et al (2003). Extraction of genomic DNA, PCR amplification of 16S rRNA and purification of the PCR products from strains 117 T and 43401 T were carried out by following the procedures described by Rainey et al (1996); the purified PCR products were sequenced directly, according to the method of Lu et al (2001).…”

mentioning

confidence: 99%

Nocardia jiangxiensis sp. nov. and Nocardia miyunensis sp. nov., isolated from acidic soils

Cui

Wang

Huang

et al. 2005

International Journal of Systematic and Evolutionary Microbiology

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The taxonomic positions of two soil actinomycetes, strains 117T and 43401T, provisionally assigned to the genus Nocardia were determined in a polyphasic study. The organisms were found to have phenotypic properties typical of members of the genus Nocardia, and formed a distinct branch in the Nocardia 16S rRNA gene tree. It was evident from the phylogenetic data that the isolates were most closely, albeit loosely, associated with the type strains of Nocardia nova and Nocardia pseudobrasiliensis. However, all four of these organisms were readily distinguishable from one another using DNA–DNA relatedness and phenotypic data. It is evident from the genotypic and phenotypic data that the two isolates should be recognized as novel species of the genus Nocardia. It is proposed, therefore, that strains 117T (=CGMCC 4.1904T=JCM 12860T) and 43401T (=CGMCC 4.1905T=JCM 12861T) be classified in the genus Nocardia as the type strains of Nocardia miyunensis sp. nov. and Nocardia jiangxiensis sp. nov., respectively.

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“…Since this work was submitted for publication, two more species of Nocardia have been described, Nocardia cerradoensis (Albuquerque de Barros et al, 2003) and Nocardia caishijiensis (Zhang et al, 2003).…”

Section: Note Added In Proofmentioning

confidence: 99%

Nocardia puris sp. nov.

Yassin

Sträubler

Schümann

et al. 2003

International Journal of Systematic and Evolutionary Microbiology

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A bacterial isolate (IMMIB R-145 T ) from a human abscess was subjected to a polyphasic taxonomic study. Chemotaxonomic investigations revealed the isolate to have cell wall chemotype IV and mycolic acids consistent with characteristics of the genus Nocardia. Comparative 16S rRNA gene sequencing showed that the isolate constituted a distinct subline within the genus Nocardia, displaying greater than 1?7 % sequence divergence with established species. However, a DNA-DNA hybridization study demonstrated unambiguously that the isolate was genealogically distinct from closely related species, namely, Nocardia abscessus, Nocardia cyriacigeorgica and Nocardia farcinica, with which it showed high levels of 16S rDNA sequence similarity (97?8, 97?9 and 98?3 %, respectively). Based on phenotypic and phylogenetic data, it is proposed that this isolate be classified as a new species of the genus Nocardia, for which the name Nocardia puris (type strain IMMIB R-145 T =DSM 44599 T =NRRL B-24204 T ) is proposed.

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Nocardia caishijiensis sp. nov., a novel soil actinomycete

Cited by 34 publications

References 44 publications

Saccharopolyspora shandongensis sp. nov., isolated from wheat-field soil

Saccharopolyspora shandongensis sp. nov., isolated from wheat-field soil

Nocardia jiangxiensis sp. nov. and Nocardia miyunensis sp. nov., isolated from acidic soils

Nocardia puris sp. nov.

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