2016
DOI: 10.1111/jeu.12355
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Phylogenetic Analyses Support Validity of Genus Eodinium (Ciliophora, Entodiniomorphida, Ophryoscolecidae)

Abstract: The validity of genus Eodinium has been historically disputed due to morphological similarities with Diplodinium (absence of skeletal plates as well as adoral and dorsal ciliary zones at the same body level). To address this issue, the 18S rDNA of four Eodinium posterovesiculatum morphotypes and four Diplodinium anisacanthum morphotypes were sequenced and phylogenetically analyzed. The different inference methods suggest the existence of a last common ancestor of Eodinium and Ostracodinium that is not shared w… Show more

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Cited by 10 publications
(4 citation statements)
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“…At least four replicates were counted per sample and per ciliate species. The protozoan genera and species were identified according to the size and the shape of cells, skeletal plates (if present), macronucleus, and ciliature arrangement (Dogiel, 1927 ; Ogimoto and Imai, 1981 ; Williams and Coleman, 1992 ; Ito and Imai, 1998 ; Ito et al, 2001 ; Cedrola et al, 2017a , b , 2018 ). Different staining procedures were used to stain skeletal plates (iodine solution), nuclei (methyl green-formalin-saline and chrome-alum-carmine), and infraciliature (pyridinated silver carbonate method) (Ogimoto and Imai, 1981 ).…”
Section: Methodsmentioning
confidence: 99%
“…At least four replicates were counted per sample and per ciliate species. The protozoan genera and species were identified according to the size and the shape of cells, skeletal plates (if present), macronucleus, and ciliature arrangement (Dogiel, 1927 ; Ogimoto and Imai, 1981 ; Williams and Coleman, 1992 ; Ito and Imai, 1998 ; Ito et al, 2001 ; Cedrola et al, 2017a , b , 2018 ). Different staining procedures were used to stain skeletal plates (iodine solution), nuclei (methyl green-formalin-saline and chrome-alum-carmine), and infraciliature (pyridinated silver carbonate method) (Ogimoto and Imai, 1981 ).…”
Section: Methodsmentioning
confidence: 99%
“…To make this section more useful to some readers who need to choose a primer set in analyzing rumen protozoa, we evaluated the primers that have been used commonly with respect to their coverage and specificity using in silico evaluation. Briefly, using TestPrime 1.0, we compared the sequences of each primer set against the recent SILVA non-redundant SSU reference dataset (SSU r132), which contains over 400 reference 18S rRNA gene sequences representing 15 genera and 29 species of protozoa, including C. ventriculi (Kittelmann et al, 2015) and Eodinium posterovesiculatum (Cedrola et al, 2017), within subclass Trichostomatia, which covers all rumen ciliates. Coverage and specificity of each primer set were calculated as below (Raymann et al, 2017 Table 1 summarizes the evaluation results of the primer sets.…”
Section: Primer Coverage and Specificity For Protozoal Community Analmentioning
confidence: 99%
“…Baroin-Tourancheau [26] state that phylogeny trees based on 18S rRNA present fairly congruent data that often correspond to the taxa defined by means of morphological studies. Molecular studies using the 18S-rRNA gene [27,28] indicate that the morphotypes of E. posterovesiculatum are grouped in a clade with high support values and have high genetic similarity (99.9%), which suggests that they constitute the same species. This agrees with the data obtained through the morphological and morphometric characterization performed in the current study.…”
Section: Discussionmentioning
confidence: 99%