The non-invasive approach for early cancer detection promises a screening assay accessible for everyone. However, the delivery of this promise is limited due mostly to the high sequencing cost associated with available assays. Here, we developed a multimodal assay called SPOT-MAS (Screening for the Presence Of Tumor by Methylation And Size) to simultaneously profile methylomics, fragmentomics, copy number, and end motifs in a single workflow using targeted and shallow genome-wide sequencing of cell-free DNA. We applied SPOT-MAS to 738 nonmetastatic patients with breast, colorectal, gastric, lung and liver cancer, and 1,550 healthy controls. SPOT-MAS detected the five cancer types with a sensitivity of 72.4% and specificity of 97.0%, with AUC of 0.95 (95% CI 0.93-0.96). For tumor-of-origin, a graph convolutional neural network was adopted and could achieve an accuracy of 0.7. In conclusion, our study demonstrates comparable performance to other early cancer detection assays while requiring significantly lower sequencing depth, making it economically feasible for population-wide screening.
This study is to investigate the capability of producing lignin-based phenol-formaldehyde adhesive (LBPFA) with lignin derived from coir pith collected in the Mekong Delta, Viet Nam. The LBPFA synthetic process underwent non chemical modifications to minimize petrochemicals and energy. Effective factors as reaction time, reaction temperature and various lignin contents of phenol substitution were examined. Physical, chemical and thermal properties containing formaldehyde content, viscosity, solid content, Fourier transformed infrared spectroscopy (FTIR), differential scanning calorimetry (DSC), tensile strength, tensile modulus and tensile strain were conducted. LBPFA was successfully synthesized at various levels of lignin contents substituting for phenol. The LBPFA’s parameters were in accordance with GB/T14372-2006 standard. The optimum reaction time, reaction temperature and lignin replacement content for LBPFA synthesis process were identified at 180 minutes, 900C and 40% wt/wt, respectively. The LBPFA showed the highest dry and wet tensile strengths of 14.42 MPa and 7.66 MPa on wooden boards compared to corresponding figures of commercial resin with 2.98 MPa and 0 MPa, respectively. For plywood, bending strength shown in LBPFA and commercial adhesive were 15.97 MPa and 20.16 MPa, respectively.
Opuntia stricta var. dillenii and Atriplex hortensis var. rubra, two plant species with abundant betalain and flavonoid content, were studied by high performance countercurrent chromatography (HPCCC) coupled with ESI-MS/MS in an off-line detection process. Both CCC runs used tert.-butyl-methyl-ether/n-butanol/acetonitrile/water 1% trifluoroacetic acid (v/v/v/v, 2:2:1:5) as a biphasic solvent system within an elution-extrusion mode. The resulting fractions were scanned by an off-line sequential injection to ESI-MS/MS approach. The separation of Opuntia stricta var. dillenii extract showed a partial isolation of principal betalains (betanin) from their derivatives (betanidin, phyllocactin, feruloyl-betanin, betaxanthin), degraded products (hydroxyl-neobetanin, mono decarboxy-betanins), and flavonoid glycosides (isorhamnetin-rutinoside, kaempferol-rutinoside). In case of Atriplex hortensis var. rubra, this study confirmed the coexistence of several flavonoids (quercetin-O-malonyl glucoside, kaempferol-O-malonyl glucoside) and generated few pure pigment fractions (celosianin II) for structural elucidation.
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